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Table 1 HIV-1 protein sequences used in this study

From: Elicitation from virus-naive individuals of cytotoxic T lymphocytes directed against conserved HIV-1 epitopes

  Sequences*
GENE Total A-A1 B C D F1 F2 G H K O 01 02 04 06 10 11 12 CPZ
GAG 207 10 37 28 5 7 2 4 3 3 5 14 8 3 4 3 4 3 5
POL 204 11 34 26 5 4 3 4 3 2 5 14 12 3 4 3 5 3 5
ENV 408 24 128 51 17 5 5 9 3 2 10 33 16 3 5 3 6 3 5
VIF 427 28 190 40 13 5 5 5 3 2 24 15 12 3 4 3 4 12 5
TAT 219 11 39 29 7 6 3 4 3 2 4 14 14 3 6 3 4 3 5
REV 231 13 39 38 10 6 3 4 3 2 4 17 12 3 4 3 4 3 5
VPU/VPX 333 14 87 50 18 6 3 6 3 2 15 25 14 3 4 3 4 3 5
VPR 368 9 142 44 7 4 3 5 3 2 25 16 12 3 4 3 4 3 5
NEF 449 12 282 44 4 4 3 7 5 2 4 31 12 3 4 3 11 3 4
  1. *HIV-1 sequences were obtained from the HIV database for the indicated clade categories.